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by Keyword: Framework
Grolleman, Janine, Bouten, Carlijn V C, Conte, Vito, Sahlgren, Cecilia M, (2025). An integrated 2D framework for quantifying cellular mechanics reveals the impact of juxtacrine Notch signalling on directed collective migration of endothelial cells BMC BIOLOGY 23, 291
BackgroundCollective migration is the coordinated movement of a group of cells-a fundamental process in health and disease. Many models have been developed to study the molecular and physical mechanisms of collective migration. However, the aim of this study is to engineer a flexible in vitro framework that allows for mechanobiological quantification of the separate and combined contributions of individual cell mechanics to the directed migration of a collective. We utilised this framework to understand the role of juxtacrine Notch signalling during collective endothelial migration-an essential process during the formation of new blood vessels (known as angiogenesis).ResultsThis framework enables users to perform high spatiotemporal analysis of migrative behaviour, cell-matrix traction forces, and intercellular forces in different microenvironments. With this framework, we show that Notch inhibited collectives adopt a distinct regime of directed collective migration. Whereas the directionality of migration, traction forces and intercellular forces are not affected by Notch inhibition, we observed spatiotemporal differences in migration speed, traction force magnitude and normal and shear stresses within Notch-inhibited collectives.ConclusionsThe in vitro framework is a powerful approach for dissecting the mechanisms of collective migration. With this framework, we show that a potential link exists between the juxtacrine signalling of Notch and an increased mechanical cohesiveness among collective cells.
JTD Keywords: Angiogenesis, Cell-cell dynamics, Cell-matrix dynamics, Collective endothelial migration, Dynamics, Forces, In vitro framework, Juxtacrine notch signalling, Migration kinematics, Morphogenesis, Organization
Ju, Xiaohui, Chen, Chuanrui, Oral, Cagatay M, Sevim, Semih, Golestanian, Ramin, Sun, Mengmeng, Bouzari, Negin, Lin, Xiankun, Urso, Mario, Nam, Jong Seok, Cho, Yujang, Peng, Xia, Landers, Fabian C, Yang, Shihao, Adibi, Azin, Taz, Nahid, Wittkowski, Raphael, Ahmed, Daniel, Wang, Wei, Magdanz, Veronika, Medina-Sanchez, Mariana, Guix, Maria, Bari, Naimat, Behkam, Bahareh, Kapral, Raymond, Huang, Yaxin, Tang, Jinyao, Wang, Ben, Morozov, Konstantin, Leshansky, Alexander, Abbasi, Sarmad Ahmad, Choi, Hongsoo, Ghosh, Subhadip, Fernandes, Barbara Borges, Battaglia, Giuseppe, Fischer, Peer, Ghosh, Ambarish, Sanchez, Beatriz Jurado, Escarpa, Alberto, Martinet, Quentin, Palacci, Jeremie, Lauga, Eric, Moran, Jeffrey, Ramos-Docampo, Miguel A, Stadler, Brigitte, Restrepo, Ramon Santiago Herrera, Yossifon, Gilad, Nicholas, James D, Ignes-Mullol, Jordi, Puigmarti-Luis, Josep, Liu, Yutong, Zarzar, Lauren D, Shields, C Wyatt, Li, Longqiu, Li, Shanshan, Ma, Xing, Gracias, David H, Velev, Orlin, Sanchez, Samuel, Esplandiu, Maria Jose, Simmchen, Juliane, Lobosco, Antonio, Misra, Sarthak, Wu, Zhiguang, Li, Jinxing, Kuhn, Alexander, Nourhani, Amir, Maric, Tijana, Xiong, Ze, Aghakhani, Amirreza, Mei, Yongfeng, Tu, Yingfeng, Peng, Fei, Diller, Eric, Sakar, Mahmut Selman, Sen, Ayusman, Law, Junhui, Sun, Yu, Pena-Francesch, Abdon, Villa, Katherine, Li, Huaizhi, Fan, Donglei Emma, Liang, Kang, Huang, Tony Jun, Chen, Xiang-Zhong, Tang, Songsong, Zhang, Xueji, Cui, Jizhai, Wang, Hong, Gao, Wei, Bandari, Vineeth Kumar, Schmidt, Oliver G, Wu, Xianghua, Guan, Jianguo, Sitti, Metin, Nelson, Bradley J, Pane, Salvador, Zhang, Li, Shahsavan, Hamed, He, Qiang, Kim, Il-Doo, Wang, Joseph, Pumera, Martin, (2025). Technology Roadmap of Micro/Nanorobots ACS Nano 19, 24174-24334
Inspired by Richard Feynman's 1959 lecture and the 1966 film Fantastic Voyage, the field of micro/nanorobots has evolved from science fiction to reality, with significant advancements in biomedical and environmental applications. Despite the rapid progress, the deployment of functional micro/nanorobots remains limited. This review of the technology roadmap identifies key challenges hindering their widespread use, focusing on propulsion mechanisms, fundamental theoretical aspects, collective behavior, material design, and embodied intelligence. We explore the current state of micro/nanorobot technology, with an emphasis on applications in biomedicine, environmental remediation, analytical sensing, and other industrial technological aspects. Additionally, we analyze issues related to scaling up production, commercialization, and regulatory frameworks that are crucial for transitioning from research to practical applications. We also emphasize the need for interdisciplinary collaboration to address both technical and nontechnical challenges, such as sustainability, ethics, and business considerations. Finally, we propose a roadmap for future research to accelerate the development of micro/nanorobots, positioning them as essential tools for addressing grand challenges and enhancing the quality of life.
JTD Keywords: Catalytic nanomotor, Chemically powered nanomotors, Collective behavior, Drug-delivery, Functionality, Humans, Intelligence, Janus micromotors, Low-reynolds-number, Metal-organic frameworks, Micro/nanorobots, Motion control, Multiparticle collision dynamics, Nanotechnology, Near-infrared light, Propulsion, Robotics, Self-propelled micromotors, Smart materials, Technological translatio, Technological translation
Liu, M, Zhang, C, Gong, XM, Zhang, T, Lian, MM, Chew, EGY, Cardilla, A, Suzuki, K, Wang, HM, Yuan, Y, Li, Y, Naik, MY, Wang, YX, Zhou, BR, Soon, WZ, Aizawa, E, Li, P, Low, JH, Tandiono, M, Montagud, E, Moya-Rull, D, Esteban, CR, Luque, Y, Fang, ML, Khor, CC, Montserrat, N, Campistol, JM, Belmonte, JCI, Foo, JN, Xia, Y, (2024). Kidney organoid models reveal cilium-autophagy metabolic axis as a therapeutic target for PKD both in vitro and in vivo Cell Stem Cell 31, 52-70.e8
Human pluripotent stem cell -derived kidney organoids offer unprecedented opportunities for studying polycystic kidney disease (PKD), which still has no effective cure. Here, we developed both in vitro and in vivo organoid models of PKD that manifested tubular injury and aberrant upregulation of renin-angiotensin aldosterone system. Single -cell analysis revealed that a myriad of metabolic changes occurred during cystogenesis, including defective autophagy. Experimental activation of autophagy via ATG5 overexpression or primary cilia ablation significantly inhibited cystogenesis in PKD kidney organoids. Employing the organoid xenograft model of PKD, which spontaneously developed tubular cysts, we demonstrate that minoxidil, a potent autophagy activator and an FDA -approved drug, effectively attenuated cyst formation in vivo. This in vivo organoid model of PKD will enhance our capability to discover novel disease mechanisms and validate candidate drugs for clinical translation.
JTD Keywords: Adenylate kinase, Adult, Animal cell, Animal experiment, Animal model, Animal tissue, Article, Autophagosome, Autophagy, Autophagy (cellular), Autosomal-dominant, Calcium homeostasis, Cilia, Cilium, Cohort analysis, Controlled study, Cyclic amp, Disease, Dominant polycystic kidney, Enzyme linked immunosorbent assay, Epithelium, Exon, Expression, Female, Food and drug administration, Framework, Generation, Growth, Hepatitis a virus cellular receptor 1, Human, Human cell, Humans, Immunohistochemistry, In vitro study, In vivo study, Kidney, Kidney organoid, Kidney polycystic disease, Male, Minoxidil, Mouse, Mutations, Nonhuman, Organoid, Organoids, Platelet derived growth factor beta receptor, Pluripotent stem-cells, Polycystic kidney diseases, Protein kinase lkb1, Renin, Sequestosome 1, Single cell analysis, Single cell rna seq, Small nuclear rna, Tunel assay, Upregulation, Western blotting, Whole exome sequencing
Verschure, PFMJ, Wierenga, S, (2022). Future memory: a digital humanities approach for the preservation and presentation of the history of the Holocaust and Nazi crimes Holocaust Studies 28, 331-357
We describe the concepts, methodology, technology, and practice of a user-centric and historical space-oriented approach towards Historical and Cultural Learning (HCL). The Future Memory project pursues the unifying hypothesis that physical space can play a critical role in the authentication and education of this singular historical event, or space as a frame for memory formation and a source of authentication. We illustrate these aspects in the context of concrete Future Memory projects realized over the last ten years in collaboration with several memorial sites, museums, and archives. Based on these experiences, we subsequently analyze the lessons learned and future challenges.
JTD Keywords: Augmented reality, Behavior, Commemoration, Design, Digital heritage, Experience, Framework, Future memory, Mobile, Navigation, Place cells, Post-wtiness era, Space, Virtual reality